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void | load_time (const std::string dim_name, const std::string filename) |
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void | load_depth (const std::string dim_name, const std::string filename) |
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void | load_latitude (const std::string dim_name, const std::string filename) |
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void | load_longitude (const std::string dim_name, const std::string filename) |
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void | compute_cell_areas () |
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void | load_variable (const std::string var_name, const std::string var_name_in_file, const std::string filename, const bool read_mask=true, const bool load_counts=true, const bool do_splits=true) |
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void | load_region_definitions (const std::string filename, const std::string dim_name, const std::string var_name, const MPI_Comm=MPI_COMM_WORLD) |
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void | compute_region_areas () |
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void | prepare_for_coarsened_grids (const std::string filename, const MPI_Comm=MPI_COMM_WORLD) |
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void | check_processor_divisions (const int Nprocs_in_time_input, const int Nprocs_in_depth_input, const MPI_Comm=MPI_COMM_WORLD) |
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void | gather_variable_across_depth (const std::vector< double > &var, std::vector< double > &gathered_var) const |
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void | gather_mask_across_depth (const std::vector< bool > &var, std::vector< bool > &gathered_var) const |
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size_t | local_index (const int Itime, const int Idepth, const int Ilat, const int Ilon) const |
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size_t | global_index (const int Itime, const int Idepth, const int Ilat, const int Ilon, const std::string merge_kind) const |
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size_t | index_local_to_global (const size_t index, const std::string merge_kind) const |
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size_t | index_global_to_local (const size_t index, const std::string merge_kind) const |
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void | index1to4_local (const size_t index, int &Itime, int &Idepth, int &Ilat, int &Ilon) const |
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void | index1to4_global (const size_t index, int &Itime, int &Idepth, int &Ilat, int &Ilon, const std::string merge_kind) const |
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int | Nprocs_in_time |
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int | Nprocs_in_depth |
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std::vector< double > | time |
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std::vector< double > | depth |
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std::vector< double > | latitude |
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std::vector< double > | longitude |
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int | Ntime = -1 |
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int | Ndepth = -1 |
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int | Nlat = -1 |
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int | Nlon = -1 |
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int | full_Ntime = -1 |
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int | full_Ndepth = -1 |
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MPI_Comm | MPI_Comm_Global = MPI_COMM_WORLD |
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MPI_Comm | MPI_subcomm_sametimes |
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MPI_Comm | MPI_subcomm_samedepths |
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std::vector< double > | areas |
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bool | compute_radial_vel = false |
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bool | use_depth_derivatives = false |
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bool | depth_is_elevation = false |
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bool | depth_is_increasing = true |
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std::map< std::string, std::vector< double > > | variables |
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std::vector< std::string > | region_names |
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std::map< std::string, std::vector< bool > > | regions |
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std::vector< double > | region_areas |
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std::vector< double > | region_areas_water_only |
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std::vector< double > | coarse_map_lat |
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std::vector< double > | coarse_map_lon |
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std::vector< double > | coarse_map_areas |
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std::vector< bool > | mask |
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std::vector< bool > | reference_mask |
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std::vector< bool > | mask_DEPTH |
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std::vector< int > | myCounts |
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std::vector< int > | myStarts |
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Class to store main variables.
This class is used to hold the various source data variables such as velocity components, mask, region definitions, density, etc
1.8.13